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cog5 component of oligomeric golgi complex 5 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103189354, updated on 11-Mar-2024

Summary

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Gene symbol
cog5
Gene description
component of oligomeric golgi complex 5
See related
Ensembl:ENSCMIG00000009072
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See cog5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704746.1 (25113801..25152566, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890320.1 (312108..361660)

NW_024704746.1Genomic Context describing neighboring genes Neighboring gene cAMP-dependent protein kinase type II-beta regulatory subunit Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene HMG-box transcription factor 1 Neighboring gene dihydrouridine synthase 4-like (S. cerevisiae) Neighboring gene solute carrier family 26 member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5
Names
conserved oligomeric Golgi complex subunit 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704746.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    25113801..25152566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042335141.1 → XP_042191075.1  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A4W3HWF5, V9KFU3
    Conserved Domains (1) summary
    pfam10392
    Location:19 → 141
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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