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LOC103186370 glucosaminyl (N-acetyl) transferase 4 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103186370, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103186370
Gene description
glucosaminyl (N-acetyl) transferase 4
See related
Ensembl:ENSCMIG00000018065
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
gcnt4
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Genomic context

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See LOC103186370 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704742.1 (116704336..116710924, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890193.1 (524066..530653, complement)

NW_024704742.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA15 Neighboring gene NSA2 ribosome biogenesis homolog (S. cerevisiae) Neighboring gene family with sequence similarity 169 member Ab Neighboring gene ankyrin repeat domain-containing protein 31 Neighboring gene uncharacterized LOC121848041 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
Names
glucosaminyl (N-acetyl) transferase 4, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704742.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    116704336..116710924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042334744.1 → XP_042190678.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2

  2. XM_007905344.2 → XP_007903535.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1

    See identical proteins and their annotated locations for XP_007903535.1

    UniProtKB/TrEMBL
    A0A4W3JLR8
    Related
    ENSCMIP00000043562.1
    Conserved Domains (1) summary
    pfam02485
    Location:131 → 399
    Branch; Core-2/I-Branching enzyme

  3. XM_007905343.2 → XP_007903534.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1

    See identical proteins and their annotated locations for XP_007903534.1

    UniProtKB/TrEMBL
    A0A4W3JLR8
    Conserved Domains (1) summary
    pfam02485
    Location:131 → 399
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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