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galnt14 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [ Callorhinchus milii (elephant shark) ]

Gene ID: 103181644, updated on 11-Mar-2024

Summary

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Gene symbol
galnt14
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
See related
Ensembl:ENSCMIG00000018173
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
zebrafish all
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Genomic context

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See galnt14 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704744.1 (75643284..75663662)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890114.1 (1779527..1787248, complement)

NW_024704744.1Genomic Context describing neighboring genes Neighboring gene glycerophosphocholine phosphodiesterase 1 Neighboring gene U2 spliceosomal RNA Neighboring gene calpain-14 Neighboring gene calpain small subunit 1 Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene coiled-coil domain-containing protein 177 Neighboring gene zinc transporter ZIP9-B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 14
Names
polypeptide N-acetylgalactosaminyltransferase 14-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704744.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    75643284..75663662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042333262.1 → XP_042189196.1  polypeptide N-acetylgalactosaminyltransferase 14 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:120 → 414
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:445 → 563
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_042333263.1 → XP_042189197.1  polypeptide N-acetylgalactosaminyltransferase 14 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:120 → 414
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:436 → 554
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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