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cep104 centrosomal protein 104 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103181371, updated on 11-Mar-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
See related
Ensembl:ENSCMIG00000002713
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704765.1 (2804498..2888054)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890111.1 (2439947..2523078)

NW_024704765.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C1orf174 homolog Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene DNA fragmentation factor, beta polypeptide (caspase-activated DNase) Neighboring gene small nucleolar RNA U109 Neighboring gene small nucleolar RNA U109 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, like Neighboring gene kinesin family member 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa
Names
centrosomal protein CEP104

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704765.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    2804498..2888054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042343548.1 → XP_042199482.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    V9KBN0
    Conserved Domains (2) summary
    PRK14954
    Location:317 → 403
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional
    sd00044
    Location:490 → 518
    HEAT; HEAT repeat [structural motif]

  2. XM_007897797.2 → XP_007895988.2  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    V9KBN0
    Conserved Domains (2) summary
    PRK14954
    Location:317 → 403
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional
    sd00044
    Location:490 → 518
    HEAT; HEAT repeat [structural motif]

  3. XM_007897799.2 → XP_007895990.2  centrosomal protein of 104 kDa isoform X3

    UniProtKB/TrEMBL
    V9KBN0
    Conserved Domains (2) summary
    PRK14954
    Location:258 → 344
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional
    sd00044
    Location:431 → 459
    HEAT; HEAT repeat [structural motif]

  4. XM_007897798.2 → XP_007895989.2  centrosomal protein of 104 kDa isoform X2

    UniProtKB/TrEMBL
    V9KBN0
    Conserved Domains (2) summary
    PRK14954
    Location:277 → 363
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional
    sd00044
    Location:450 → 478
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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