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eogt EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [ Callorhinchus milii (elephant shark) ]

Gene ID: 103179783, updated on 11-Mar-2024

Summary

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Gene symbol
eogt
Gene description
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
See related
Ensembl:ENSCMIG00000007011
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See eogt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704753.1 (5124144..5146892)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890091.1 (3805272..3828006, complement)

NW_024704753.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene TATA element modulatory factor 1 Neighboring gene U4 spliceosomal RNA Neighboring gene TAFA chemokine like family member 4b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase
Names
EGF domain specific O-linked N-acetylglucosamine transferase
putative glycosyltransferase AER61
putative glycosyltransferase AER61-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704753.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    5124144..5146892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007895202.2 → XP_007893393.2  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1

    UniProtKB/TrEMBL
    A0A4W3HB36

  2. XM_042339600.1 → XP_042195534.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2

    UniProtKB/TrEMBL
    A0A4W3HB36
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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