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b3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103178875, updated on 11-Mar-2024

Summary

Gene symbol
b3galnt2
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSCMIG00000011473
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
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Genomic context

See b3galnt2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704744.1 (58349028..58366217)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890084.1 (588288..604259, complement)

NW_024704744.1Genomic Context describing neighboring genes Neighboring gene lysosomal trafficking regulator Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 Neighboring gene tubulin folding cofactor E Neighboring gene geranylgeranyl diphosphate synthase 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704744.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    58349028..58366217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007893836.2XP_007892027.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A4W3IZY3, A0A4W3IZZ4
    Related
    ENSCMIP00000026165.1
    Conserved Domains (1) summary
    cl21608
    Location:301451
    Galactosyl_T; Galactosyltransferase