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LOC103178281 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like [ Callorhinchus milii (elephant shark) ]

Gene ID: 103178281, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103178281
Gene description
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like
See related
Ensembl:ENSCMIG00000015366
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
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Genomic context

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See LOC103178281 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704744.1 (49237065..49240117, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890079.1 (2896299..2944773)

NW_024704744.1Genomic Context describing neighboring genes Neighboring gene four and a half LIM domains protein 2 Neighboring gene UFM1-specific ligase 1 Neighboring gene fucosyltransferase 9a Neighboring gene glycoprotein endo-alpha-1,2-mannosidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like
Names
alpha-(1,3)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704744.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    49237065..49240117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007892924.1 → XP_007891115.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A4W3J2X2
    Conserved Domains (2) summary
    pfam00852
    Location:216 → 384
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:92 → 200
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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