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chst7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103177115, updated on 11-Mar-2024

Summary

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Gene symbol
chst7
Gene description
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
See related
Ensembl:ENSCMIG00000016591
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See chst7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704745.1 (78418056..78425697)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890071.1 (1421313..1428971, complement)

NW_024704745.1Genomic Context describing neighboring genes Neighboring gene cytoplasmic FMR1 interacting protein 1 Neighboring gene tubulin gamma complex component 5 Neighboring gene solute carrier family 9 member 7 Neighboring gene RP2 activator of ARL3 GTPase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 7
Names
carbohydrate sulfotransferase 7-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704745.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    78418056..78425697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007891096.2 → XP_007889287.2  carbohydrate sulfotransferase 7

    UniProtKB/TrEMBL
    A0A4W3JNF5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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