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prkar2aa protein kinase, cAMP-dependent, regulatory, type II, alpha A [ Callorhinchus milii (elephant shark) ]

Gene ID: 103176651, updated on 24-Sep-2024

Summary

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Gene symbol
prkar2aa
Gene description
protein kinase, cAMP-dependent, regulatory, type II, alpha A
See related
Ensembl:ENSCMIG00000018769
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
zebrafish all
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Genomic context

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See prkar2aa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704753.1 (13851957..13967206)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890068.1 (3606042..3619765)

NW_024704753.1Genomic Context describing neighboring genes Neighboring gene ariadne homolog 2 (Drosophila) Neighboring gene rab GDP dissociation inhibitor alpha Neighboring gene inositol hexakisphosphate kinase 2 Neighboring gene transfer RNA asparagine (anticodon GUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase, cAMP-dependent, regulatory, type II, alpha A
Names
cAMP-dependent protein kinase type II-alpha regulatory subunit-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704753.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    13851957..13967206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007890323.2 → XP_007888514.1  protein kinase, cAMP-dependent, regulatory, type II, alpha A isoform X1

    See identical proteins and their annotated locations for XP_007888514.1

    UniProtKB/TrEMBL
    A0A4W3K3U6, V9KCD4
    Related
    ENSCMIP00000045586.1
    Conserved Domains (2) summary
    PTZ00169
    Location:17 → 283
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:114 → 204
    Mito_carr; Mitochondrial carrier protein

  2. XM_042339775.1 → XP_042195709.1  protein kinase, cAMP-dependent, regulatory, type II, alpha A isoform X2

    Conserved Domains (3) summary
    cd12103
    Location:212 → 252
    DD_RIIalpha_PKA; Dimerization/Docking domain of the Type II alpha Regulatory subunit of cAMP-dependent protein kinase
    cd00038
    Location:354 → 466
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    PTZ00169
    Location:17 → 203
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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