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nkd1 NKD inhibitor of WNT signaling pathway 1 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103176172, updated on 11-Mar-2024

Summary

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Gene symbol
nkd1
Gene description
NKD inhibitor of WNT signaling pathway 1
See related
Ensembl:ENSCMIG00000017202
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See nkd1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704755.1 (9318395..9371087)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890065.1 (7906328..7943362)

NW_024704755.1Genomic Context describing neighboring genes Neighboring gene bromodomain containing 7 Neighboring gene uncharacterized LOC103176083 Neighboring gene sorting nexin 20 Neighboring gene cylindromatosis (turban tumor syndrome), a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein naked cuticle homolog 1
Names
NKD1, WNT signaling pathway inhibitor
naked cuticle homolog 1
protein naked cuticle-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704755.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    9318395..9371087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042340320.1 → XP_042196254.1  protein naked cuticle homolog 1 isoform X1

    UniProtKB/TrEMBL
    V9KTJ9, V9KTX6

  2. XM_042340323.1 → XP_042196257.1  protein naked cuticle homolog 1 isoform X3

    UniProtKB/TrEMBL
    V9KTJ9

  3. XM_042340322.1 → XP_042196256.1  protein naked cuticle homolog 1 isoform X2

    UniProtKB/TrEMBL
    V9KTJ9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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