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slc25a29l solute carrier family 25 member 29-like [ Callorhinchus milii (elephant shark) ]

Gene ID: 103175332, updated on 26-Sep-2024

Summary

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Gene symbol
slc25a29l
Gene description
solute carrier family 25 member 29-like
See related
Ensembl:ENSCMIG00000015344
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
slc25a29
Orthologs
zebrafish all
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Genomic context

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See slc25a29l in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704750.1 (5171666..5187572)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890062.1 (11919873..11941708, complement)

NW_024704750.1Genomic Context describing neighboring genes Neighboring gene tryptophanyl-tRNA synthetase 1 Neighboring gene solute carrier family 25 member 47b Neighboring gene YY1 transcription factor a Neighboring gene delta(4)-desaturase, sphingolipid 2 Neighboring gene ena/VASP-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter
Names
mitochondrial carnitine/acylcarnitine carrier protein CACL
solute carrier family 25 member 29

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704750.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    5171666..5187572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007888328.2 → XP_007886519.1  mitochondrial basic amino acids transporter

    See identical proteins and their annotated locations for XP_007886519.1

    UniProtKB/TrEMBL
    V9KJK3
    Related
    ENSCMIP00000036293.1
    Conserved Domains (1) summary
    pfam00153
    Location:193 → 272
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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