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SDC3 syndecan 3 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 103169156, updated on 30-Apr-2024

Summary

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Gene symbol
SDC3
Gene description
syndecan 3
See related
Ensembl:ENSOANG00000038243
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See SDC3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 16 NC_041743.1 (46061275..46086057, complement)

Chromosome 16 - NC_041743.1Genomic Context describing neighboring genes Neighboring gene matrilin 1 Neighboring gene lysosomal protein transmembrane 5 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene pumilio RNA binding family member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041743.1 Chromosome 16 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041743.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    46061275..46086057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029080196.2 → XP_028936029.1  syndecan-3

    UniProtKB/TrEMBL
    A0A6I8P591
    Related
    ENSOANP00000049160.1
    Conserved Domains (2) summary
    PRK12270
    Location:53 → 127
    kgd; alpha-ketoglutarate decarboxylase; Reviewed
    pfam01034
    Location:364 → 426
    Syndecan; Syndecan domain
Nucleotide Protein
Heading Accession and Version

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