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CLEC17A C-type lectin domain containing 17A [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 103168381, updated on 19-Jun-2024

Summary

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Gene symbol
CLEC17A
Gene description
C-type lectin domain containing 17A
See related
Ensembl:ENSOANG00000049128
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human all
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Genomic context

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See CLEC17A in Genome Data Viewer
Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 7 NC_041734.1 (59834836..59845779, complement)

Chromosome 7 - NC_041734.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type containing 11A Neighboring gene small nuclear ribonucleoprotein polypeptide E Neighboring gene uncharacterized LOC103171255 Neighboring gene NADH:ubiquinone oxidoreductase subunit B7 Neighboring gene trans-2,3-enoyl-CoA reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041734.1 Chromosome 7 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological process involved in interspecies interaction between organisms IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 17, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041734.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    59834836..59845779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039912786.1 → XP_039768720.1  C-type lectin domain family 17, member A isoform X2

    Conserved Domains (1) summary
    cd03590
    Location:197 → 317
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

  2. XM_029068552.2 → XP_028924385.1  C-type lectin domain family 17, member A isoform X1

    UniProtKB/TrEMBL
    A0A6I8NAB6
    Related
    ENSOANP00000037705.1
    Conserved Domains (1) summary
    cd03590
    Location:235 → 355
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
Nucleotide Protein
Heading Accession and Version

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