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UNC5C unc-5 netrin receptor C [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 103167271, updated on 30-Apr-2024

Summary

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Gene symbol
UNC5C
Gene description
unc-5 netrin receptor C
See related
Ensembl:ENSOANG00000022739
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See UNC5C in Genome Data Viewer
Location:
chromosome: 12
Exon count:
17
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 12 NC_041739.1 (51016728..51262523)

Chromosome 12 - NC_041739.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA7 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene bone morphogenetic protein receptor type 1B Neighboring gene small nucleolar RNA SNORA7 Neighboring gene small nucleolar RNA SNORA7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041739.1 Chromosome 12 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables netrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in netrin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
netrin receptor UNC5C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041739.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    51016728..51262523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029076389.2 → XP_028932222.1  netrin receptor UNC5C isoform X1

    UniProtKB/TrEMBL
    F6X4U0
    Related
    ENSOANP00000029055.3
    Conserved Domains (5) summary
    smart00218
    Location:546 → 649
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    smart00209
    Location:263 → 314
    TSP1; Thrombospondin type 1 repeats
    pfam17217
    Location:696 → 835
    UPA; UPA domain
    cl11960
    Location:171 → 257
    Ig; Immunoglobulin domain
    cl14633
    Location:862 → 944
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_029076390.2 → XP_028932223.1  netrin receptor UNC5C isoform X2

    UniProtKB/TrEMBL
    A0A6I8NGT5
    Related
    ENSOANP00000040320.1
    Conserved Domains (5) summary
    smart00218
    Location:527 → 630
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    smart00209
    Location:263 → 314
    TSP1; Thrombospondin type 1 repeats
    pfam17217
    Location:677 → 816
    UPA; UPA domain
    cl11960
    Location:171 → 257
    Ig; Immunoglobulin domain
    cl14633
    Location:843 → 925
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
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