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cebpz CCAAT enhancer binding protein zeta [ Poecilia formosa (Amazon molly) ]

Gene ID: 103156410, updated on 11-Mar-2024

Summary

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Gene symbol
cebpz
Gene description
CCAAT enhancer binding protein zeta
See related
Ensembl:ENSPFOG00000003831
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See cebpz in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800419.1 (164496..170943)

NW_006800419.1Genomic Context describing neighboring genes Neighboring gene protein kinase D3 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 7 Neighboring gene connector enhancer of kinase suppressor of ras 3-like Neighboring gene protein CEBPZOS-like Neighboring gene NK2 homeobox 2b Neighboring gene NK2 homeobox 4b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800419.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCAAT/enhancer-binding protein zeta
Names
CCAAT/enhancer binding protein (C/EBP), zeta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800419.1 Reference Poecilia_formosa-5.1.2

    Range
    164496..170943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016664333.1 → XP_016519819.1  CCAAT/enhancer-binding protein zeta isoform X1

    UniProtKB/TrEMBL
    A0A096LRA9

  2. XM_007578447.2 → XP_007578509.1  CCAAT/enhancer-binding protein zeta isoform X2

    UniProtKB/TrEMBL
    A0A087XDY7, A0A096LRA9
    Related
    ENSPFOP00000003990.2, ENSPFOT00000003998.2
    Conserved Domains (2) summary
    COG5593
    Location:157 → 958
    COG5593; Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis]
    pfam03914
    Location:501 → 702
    CBF; CBF/Mak21 family
Nucleotide Protein
Heading Accession and Version

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