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rnaseh1 ribonuclease H1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103156406, updated on 11-Mar-2024

Summary

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Gene symbol
rnaseh1
Gene description
ribonuclease H1
See related
Ensembl:ENSPFOG00000002841
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See rnaseh1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800419.1 (83487..97980, complement)

NW_006800419.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein 6-B-like Neighboring gene uncharacterized LOC107833925 Neighboring gene BRF1 general transcription factor IIIB subunit b Neighboring gene E2F transcription factor 6 Neighboring gene myelin transcription factor 1-like, a Neighboring gene uncharacterized LOC107833924 Neighboring gene protein kinase D3 Neighboring gene ribosomal protein S7 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800419.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication, removal of RNA primer IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease H1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800419.1 Reference Poecilia_formosa-5.1.2

    Range
    83487..97980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016664348.1 → XP_016519834.1  ribonuclease H1 isoform X1

    UniProtKB/TrEMBL
    A0A087XAI0

  2. XM_016664349.1 → XP_016519835.1  ribonuclease H1 isoform X2

    UniProtKB/TrEMBL
    A0A087XAI0, A0A096MCY6
    Related
    ENSPFOP00000029277.1, ENSPFOT00000022015.1
    Conserved Domains (2) summary
    cd09280
    Location:150 → 291
    RNase_HI_eukaryote_like; Eukaryotic RNase H is essential and is longer and more complex than their prokaryotic counterparts
    pfam01693
    Location:30 → 71
    Cauli_VI; Caulimovirus viroplasmin

  3. XM_016664347.1 → XP_016519833.1  ribonuclease H1 isoform X1

    UniProtKB/TrEMBL
    A0A087XAI0
Nucleotide Protein
Heading Accession and Version

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