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znf622 zinc finger protein 622 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103155434, updated on 11-Mar-2024

Summary

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Gene symbol
znf622
Gene description
zinc finger protein 622
See related
Ensembl:ENSPFOG00000001399
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See znf622 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800367.1 (222652..227829)

NW_006800367.1Genomic Context describing neighboring genes Neighboring gene reticulophagy regulator 1 Neighboring gene tripartite motif-containing protein 16-like Neighboring gene serum amyloid A Neighboring gene membrane-associated ring finger (C3HC4) 11 Neighboring gene myosin X

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800367.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 622

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800367.1 Reference Poecilia_formosa-5.1.2

    Range
    222652..227829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007577118.2 → XP_007577180.1  zinc finger protein 622

    See identical proteins and their annotated locations for XP_007577180.1

    UniProtKB/TrEMBL
    A0A087X6E0
    Related
    ENSPFOP00000001343.2, ENSPFOT00000001346.2
    Conserved Domains (3) summary
    sd00020
    Location:6 → 28
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:230 → 329
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
    pfam12874
    Location:71 → 93
    zf-met; Zinc-finger of C2H2 type

  2. XM_016663552.1 → XP_016519038.1  zinc finger protein 622

    UniProtKB/TrEMBL
    A0A087X6E0
    Conserved Domains (3) summary
    sd00020
    Location:6 → 28
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:230 → 329
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
    pfam12874
    Location:71 → 93
    zf-met; Zinc-finger of C2H2 type
Nucleotide Protein
Heading Accession and Version

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