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lama1 laminin, alpha 1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103154866, updated on 11-Mar-2024

Summary

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Gene symbol
lama1
Gene description
laminin, alpha 1
See related
Ensembl:ENSPFOG00000009921
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See lama1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
66
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800343.1 (204044..228170, complement)

NW_006800343.1Genomic Context describing neighboring genes Neighboring gene lethal(3)malignant brain tumor-like protein 4 Neighboring gene transmembrane protein 200C-like Neighboring gene protein 4.1-like Neighboring gene 5'-AMP-activated protein kinase subunit gamma-2-like Neighboring gene enoyl-CoA delta isomerase 2 Neighboring gene Ras homolog, mTORC1 binding

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800343.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800343.1 Reference Poecilia_formosa-5.1.2

    Range
    204044..228170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016663092.1 → XP_016518578.1  laminin subunit alpha-1 isoform X4

    UniProtKB/TrEMBL
    A0A087XY66

  2. XM_016663090.1 → XP_016518576.1  laminin subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A087XY66
    Related
    ENSPFOP00000010719.2, ENSPFOT00000010734.2

  3. XM_016663091.1 → XP_016518577.1  laminin subunit alpha-1 isoform X3

    UniProtKB/TrEMBL
    A0A087XY66

  4. XM_016663089.1 → XP_016518575.1  laminin subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A087XY66

  5. XM_016663094.1 → XP_016518580.1  laminin subunit alpha-1 isoform X5

    UniProtKB/TrEMBL
    A0A087XY66
Nucleotide Protein
Heading Accession and Version

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