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hs3st1l2 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103154434, updated on 11-Mar-2024

Summary

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Gene symbol
hs3st1l2
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Annotation information
Annotation category: partial on reference assembly
Orthologs
zebrafish all
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Genomic context

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See hs3st1l2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800325.1 (305907..309692, complement)

NW_006800325.1Genomic Context describing neighboring genes Neighboring gene transcriptional activator protein Pur-beta Neighboring gene histone H2A.V Neighboring gene zinc-binding protein A33-like Neighboring gene growth arrest-specific protein 8-like Neighboring gene glutathione S-transferase theta-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800325.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800325.1 Reference Poecilia_formosa-5.1.2

    Range
    305907..309692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007575714.2 → XP_007575776.1  heparan sulfate glucosamine 3-O-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A087XPG8
    Conserved Domains (1) summary
    pfam00685
    Location:59 → 292
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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