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LOC103152854 gastrula zinc finger protein XlCGF57.1-like [ Poecilia formosa (Amazon molly) ]

Gene ID: 103152854, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103152854
Gene description
gastrula zinc finger protein XlCGF57.1-like
See related
Ensembl:ENSPFOG00000023165
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC103152854 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799946.1 (5513598..5517537)

NW_006799946.1Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF52.1-like Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene zinc finger protein OZF-like Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene uncharacterized LOC107833127 Neighboring gene uncharacterized LOC107833128

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799946.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PcG protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF57.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799946.1 Reference Poecilia_formosa-5.1.2

    Range
    5513598..5517537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016661399.1 → XP_016516885.1  gastrula zinc finger protein XlCGF57.1-like

    UniProtKB/TrEMBL
    A0A096LTI6
    Related
    ENSPFOP00000022477.1, ENSPFOT00000022391.1
    Conserved Domains (3) summary
    COG5048
    Location:281 → 459
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:221 → 241
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:455 → 480
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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