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bcl6aa BCL6A transcription repressor a [ Poecilia formosa (Amazon molly) ]

Gene ID: 103151355, updated on 11-Mar-2024

Summary

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Gene symbol
bcl6aa
Gene description
BCL6A transcription repressor a
See related
Ensembl:ENSPFOG00000001561
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
bcl6
Orthologs
human zebrafish all
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Genomic context

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See bcl6aa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800218.1 (598669..619798)

NW_006800218.1Genomic Context describing neighboring genes Neighboring gene tumor protein p63 regulated 1 Neighboring gene LIM domain containing preferred translocation partner in lipoma Neighboring gene uncharacterized LOC103151352 Neighboring gene inositol polyphosphate-5-phosphatase D Neighboring gene smx5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800218.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell lymphoma 6 protein
Names
B cell CLL/lymphoma 6
BCL6 transcription repressor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800218.1 Reference Poecilia_formosa-5.1.2

    Range
    598669..619798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016681390.1 → XP_016536876.1  B-cell lymphoma 6 protein isoform X1

    UniProtKB/TrEMBL
    A0A087X6V5
    Conserved Domains (4) summary
    smart00225
    Location:78 → 173
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:614 → 634
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:67 → 171
    BTB; BTB/POZ domain
    pfam13465
    Location:626 → 651
    zf-H2C2_2; Zinc-finger double domain

  2. XM_016681391.1 → XP_016536877.1  B-cell lymphoma 6 protein isoform X1

    UniProtKB/TrEMBL
    A0A087X6V5
    Related
    ENSPFOP00000001508.2, ENSPFOT00000001511.2
    Conserved Domains (4) summary
    smart00225
    Location:78 → 173
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:614 → 634
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:67 → 171
    BTB; BTB/POZ domain
    pfam13465
    Location:626 → 651
    zf-H2C2_2; Zinc-finger double domain

  3. XM_007571366.2 → XP_007571428.1  B-cell lymphoma 6 protein isoform X2

    Conserved Domains (4) summary
    smart00225
    Location:47 → 142
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:583 → 603
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:36 → 140
    BTB; BTB/POZ domain
    pfam13465
    Location:595 → 620
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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