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hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103150869, updated on 28-Dec-2023

Summary

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Gene symbol
hs3st5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
See related
Ensembl:ENSPFOG00000015320
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See hs3st5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800203.1 (772099..837360)

NW_006800203.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103150872 Neighboring gene uncharacterized LOC107838490 Neighboring gene fyn-related Src family tyrosine kinase Neighboring gene histone deacetylase 2 Neighboring gene myristoylated alanine-rich protein kinase C substrate a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800203.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5
Names
heparan sulfate (glucosamine) 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800203.1 Reference Poecilia_formosa-5.1.2

    Range
    772099..837360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007570638.2 → XP_007570700.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    See identical proteins and their annotated locations for XP_007570700.1

    UniProtKB/TrEMBL
    A0A087YBG6
    Related
    ENSPFOP00000015369.1, ENSPFOT00000015391.1
    Conserved Domains (1) summary
    pfam00685
    Location:89 → 329
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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