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fubp3 far upstream element (FUSE) binding protein 3 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103149853, updated on 11-Mar-2024

Summary

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Gene symbol
fubp3
Gene description
far upstream element (FUSE) binding protein 3
See related
Ensembl:ENSPFOG00000019842
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See fubp3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799945.1 (5159737..5182015, complement)

NW_006799945.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103149835 Neighboring gene PR domain containing 12b Neighboring gene argininosuccinate synthase 1 Neighboring gene surfeit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799945.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
far upstream element-binding protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799945.1 Reference Poecilia_formosa-5.1.2

    Range
    5159737..5182015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007569223.2 → XP_007569285.1  far upstream element-binding protein 3-like isoform X3

    Conserved Domains (1) summary
    cd00105
    Location:86 → 148
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...

  2. XM_007569230.2 → XP_007569292.1  far upstream element-binding protein 3-like isoform X4

    Conserved Domains (1) summary
    cd00105
    Location:87 → 149
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...

  3. XM_007569206.2 → XP_007569268.1  far upstream element-binding protein 3-like isoform X1

    Conserved Domains (1) summary
    cd00105
    Location:87 → 149
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...

  4. XM_007569214.2 → XP_007569276.1  far upstream element-binding protein 3-like isoform X2

    UniProtKB/TrEMBL
    A0A087YPL6
    Related
    ENSPFOP00000019969.2, ENSPFOT00000019992.2
    Conserved Domains (1) summary
    cd00105
    Location:87 → 149
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
Nucleotide Protein
Heading Accession and Version

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