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LOC103148226 gastrula zinc finger protein XlCGF57.1-like [ Poecilia formosa (Amazon molly) ]

Gene ID: 103148226, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103148226
Gene description
gastrula zinc finger protein XlCGF57.1-like
See related
Ensembl:ENSPFOG00000007333
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC103148226 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800140.1 (1194..7364, complement)

NW_006800140.1Genomic Context describing neighboring genes Neighboring gene sialic acid-binding Ig-like lectin 13 Neighboring gene transmembrane 9 superfamily member 3 Neighboring gene peroxiredoxin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800140.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF26.1-like; gastrula zinc finger protein XlCGF57.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800140.1 Reference Poecilia_formosa-5.1.2

    Range
    1194..7364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007566901.2 → XP_007566963.1  gastrula zinc finger protein XlCGF57.1-like isoform X2

    Conserved Domains (5) summary
    COG5048
    Location:249 → 602
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:363 → 383
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:249 → 271
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:263 → 287
    zf-H2C2_2; Zinc-finger double domain
    cl10017
    Location:6 → 56
    Tubulin_FtsZ_Cetz-like; Tubulin protein family of FtsZ and CetZ-like

  2. XM_016679050.1 → XP_016534536.1  gastrula zinc finger protein XlCGF26.1-like isoform X3

  3. XM_016679049.1 → XP_016534535.1  gastrula zinc finger protein XlCGF57.1-like isoform X1

    UniProtKB/TrEMBL
    A0A087XN92
    Related
    ENSPFOP00000007245.2, ENSPFOT00000007257.2
Nucleotide Protein
Heading Accession and Version

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