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LOC103147299 crk-like protein [ Poecilia formosa (Amazon molly) ]

Gene ID: 103147299, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103147299
Gene description
crk-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC103147299 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799945.1 (259589..262281, complement)

NW_006799945.1Genomic Context describing neighboring genes Neighboring gene CRK like proto-oncogene, adaptor protein Neighboring gene coiled-coil domain-containing protein 74B-like Neighboring gene coiled-coil domain-containing protein 74A-like Neighboring gene crk-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799945.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
crk-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799945.1 Reference Poecilia_formosa-5.1.2

    Range
    259589..262281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007565567.2 → XP_007565629.1  crk-like protein

    See identical proteins and their annotated locations for XP_007565629.1

    UniProtKB/TrEMBL
    A0A087YP25
    Conserved Domains (3) summary
    cd09926
    Location:6 → 106
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:124 → 178
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cl17036
    Location:233 → 256
    SH3; Src Homology 3 domain superfamily

  2. XM_007565559.2 → XP_007565621.1  crk-like protein

    See identical proteins and their annotated locations for XP_007565621.1

    UniProtKB/TrEMBL
    A0A087YP25
    Conserved Domains (3) summary
    cd09926
    Location:6 → 106
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:124 → 178
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cl17036
    Location:233 → 256
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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