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hic2 hypermethylated in cancer 2 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103145875, updated on 11-Mar-2024

Summary

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Gene symbol
hic2
Gene description
hypermethylated in cancer 2
See related
Ensembl:ENSPFOG00000020465
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See hic2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800087.1 (900142..922789, complement)

NW_006800087.1Genomic Context describing neighboring genes Neighboring gene synaptosome associated protein 29 Neighboring gene phosphatidylinositol 4-kinase, catalytic, alpha b Neighboring gene serpin peptidase inhibitor, clade D (heparin cofactor), member 1 Neighboring gene G-protein coupled receptor 183-like Neighboring gene interleukin 12B 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800087.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypermethylated in cancer 2 protein
Names
HIC ZBTB transcriptional repressor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800087.1 Reference Poecilia_formosa-5.1.2

    Range
    900142..922789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007563520.2 → XP_007563582.1  hypermethylated in cancer 2 protein

    See identical proteins and their annotated locations for XP_007563582.1

    UniProtKB/TrEMBL
    A0A087YRD8
    Related
    ENSPFOP00000020591.1, ENSPFOT00000020615.1
    Conserved Domains (5) summary
    smart00225
    Location:25 → 122
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:506 → 526
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:504 → 526
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:18 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:547 → 571
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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