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kirrel3b kirre like nephrin family adhesion molecule 3b [ Poecilia formosa (Amazon molly) ]

Gene ID: 103145345, updated on 11-Mar-2024

Summary

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Gene symbol
kirrel3b
Gene description
kirre like nephrin family adhesion molecule 3b
See related
Ensembl:ENSPFOG00000002305
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
kirrel3
Orthologs
zebrafish all
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Genomic context

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See kirrel3b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800080.1 (177925..518157, complement)

NW_006800080.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 7 Neighboring gene BARX homeobox 2 Neighboring gene uncharacterized LOC107837413 Neighboring gene uncharacterized LOC107837415 Neighboring gene uncharacterized LOC107837414 Neighboring gene uncharacterized LOC103145347 Neighboring gene somatolactin alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800080.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
kin of IRRE like 3
kirre like nephrin family adhesion molecule 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800080.1 Reference Poecilia_formosa-5.1.2

    Range
    177925..518157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016676742.1 → XP_016532228.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A087X9I1

  2. XM_016676750.1 → XP_016532236.1  kin of IRRE-like protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A087X9I1
    Conserved Domains (7) summary
    cd05759
    Location:135 → 220
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:392 → 489
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:323 → 374
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:24 → 113
    IG_like; Immunoglobulin like
    pfam07679
    Location:309 → 390
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:228 → 305
    Ig_2; Immunoglobulin domain
    cl11960
    Location:22 → 113
    Ig; Immunoglobulin domain

  3. XM_016676752.1 → XP_016532238.1  kin of IRRE-like protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A087X9I1

  4. XM_016676740.1 → XP_016532226.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A087X9I1

  5. XM_016676741.1 → XP_016532227.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A087X9I1

  6. XM_016676751.1 → XP_016532237.1  kin of IRRE-like protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A087X9I1
    Conserved Domains (7) summary
    cd05759
    Location:135 → 216
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:388 → 485
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:319 → 370
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:24 → 113
    IG_like; Immunoglobulin like
    pfam07679
    Location:305 → 386
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:224 → 301
    Ig_2; Immunoglobulin domain
    cl11960
    Location:22 → 113
    Ig; Immunoglobulin domain

  7. XM_016676749.1 → XP_016532235.1  kin of IRRE-like protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A087X9I1

  8. XM_016676753.1 → XP_016532239.1  kin of IRRE-like protein 3 isoform X8

    UniProtKB/TrEMBL
    A0A087X9I1

  9. XM_016676748.1 → XP_016532234.1  kin of IRRE-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A087X9I1

  10. XM_016676754.1 → XP_016532240.1  kin of IRRE-like protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A087X9I1
    Related
    ENSPFOP00000002434.2, ENSPFOT00000002438.2
    Conserved Domains (7) summary
    cd05759
    Location:135 → 216
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:388 → 485
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:319 → 370
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:24 → 113
    IG_like; Immunoglobulin like
    pfam07679
    Location:305 → 386
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:224 → 301
    Ig_2; Immunoglobulin domain
    cl11960
    Location:22 → 113
    Ig; Immunoglobulin domain

  11. XM_016676743.1 → XP_016532229.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A087X9I1

  12. XM_016676746.1 → XP_016532232.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A087X9I1

  13. XM_016676744.1 → XP_016532230.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A087X9I1

  14. XM_016676745.1 → XP_016532231.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A087X9I1

  15. XM_016676755.1 → XP_016532241.1  kin of IRRE-like protein 3 isoform X10

    UniProtKB/TrEMBL
    A0A087X9I1
    Conserved Domains (7) summary
    cd05759
    Location:135 → 216
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:388 → 485
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:319 → 370
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:24 → 113
    IG_like; Immunoglobulin like
    pfam07679
    Location:305 → 386
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:224 → 301
    Ig_2; Immunoglobulin domain
    cl11960
    Location:22 → 113
    Ig; Immunoglobulin domain

  16. XM_016676747.1 → XP_016532233.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A087X9I1
Nucleotide Protein
Heading Accession and Version

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