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nsun6 NOP2/Sun RNA methyltransferase 6 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103140476, updated on 11-Mar-2024

Summary

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Gene symbol
nsun6
Gene description
NOP2/Sun RNA methyltransferase 6
See related
Ensembl:ENSPFOG00000016647
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See nsun6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800010.1 (2258367..2264813)

NW_006800010.1Genomic Context describing neighboring genes Neighboring gene zinc finger, AN1-type domain 1 Neighboring gene MAF1 homolog, negative regulator of RNA polymerase III b Neighboring gene ADP-ribosylation factor-like 8 Neighboring gene calcium channel, voltage-dependent, beta 2a Neighboring gene uncharacterized LOC103140477 Neighboring gene solute carrier family 39 member 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800010.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative methyltransferase NSUN6
Names
NOP2/Sun RNA methyltransferase family member 6
NOP2/Sun domain family, member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800010.1 Reference Poecilia_formosa-5.1.2

    Range
    2258367..2264813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007555649.2 → XP_007555711.1  putative methyltransferase NSUN6 isoform X1

    See identical proteins and their annotated locations for XP_007555711.1

    Conserved Domains (3) summary
    smart00359
    Location:123 → 208
    PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
    COG0144
    Location:179 → 467
    RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    cl17173
    Location:239 → 465
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_007555651.2 → XP_007555713.1  putative methyltransferase NSUN6 isoform X2

    UniProtKB/TrEMBL
    A0A087YFC1
    Related
    ENSPFOP00000016724.2, ENSPFOT00000016746.2
    Conserved Domains (3) summary
    smart00359
    Location:122 → 207
    PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
    COG0144
    Location:178 → 466
    RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    cl17173
    Location:238 → 464
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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