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ano5b anoctamin 5b [ Poecilia formosa (Amazon molly) ]

Gene ID: 103139415, updated on 11-Mar-2024

Summary

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Gene symbol
ano5b
Gene description
anoctamin 5b
See related
Ensembl:ENSPFOG00000002416
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See ano5b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800000.1 (176813..199793, complement)

NW_006800000.1Genomic Context describing neighboring genes Neighboring gene growth arrest-specific protein 2-like Neighboring gene solute carrier family 17 member 6b Neighboring gene immunoglobulin superfamily, DCC subclass, member 3 Neighboring gene piggyBac transposable element-derived protein 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800000.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800000.1 Reference Poecilia_formosa-5.1.2

    Range
    176813..199793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007554019.2 → XP_007554081.1  anoctamin-5-like isoform X2

    Conserved Domains (2) summary
    pfam04547
    Location:278 → 859
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:59 → 275
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_007554018.2 → XP_007554080.1  anoctamin-5-like isoform X1

    UniProtKB/TrEMBL
    A0A087X9R6
    Related
    ENSPFOP00000002519.1, ENSPFOT00000002523.1
    Conserved Domains (2) summary
    pfam04547
    Location:293 → 874
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:74 → 290
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
Heading Accession and Version

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