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thoc3 THO complex 3 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103136861, updated on 11-Mar-2024

Summary

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Gene symbol
thoc3
Gene description
THO complex 3
See related
Ensembl:ENSPFOG00000007685
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See thoc3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799974.1 (1563522..1567789)

NW_006799974.1Genomic Context describing neighboring genes Neighboring gene ganglioside GM2 activator Neighboring gene shootin 3 Neighboring gene complexin 2b Neighboring gene protein NLRC3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799974.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of THO complex part of transcription export complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799974.1 Reference Poecilia_formosa-5.1.2

    Range
    1563522..1567789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007550294.2 → XP_007550356.1  THO complex subunit 3

    UniProtKB/TrEMBL
    A0A087XPK4
    Related
    ENSPFOP00000007707.1, ENSPFOT00000007719.1
    Conserved Domains (3) summary
    COG2319
    Location:23 → 308
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:20 → 269
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:38 → 76
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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