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LOC103135524 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103135524, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103135524
Gene description
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
See related
Ensembl:ENSPFOG00000005118
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
ndst1
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Genomic context

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See LOC103135524 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799965.1 (898767..969514, complement)

NW_006799965.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein FLA10 Neighboring gene CD74 molecule, major histocompatibility complex, class II invariant chain a Neighboring gene RNA binding motif protein 22 Neighboring gene myozenin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799965.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
Names
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799965.1 Reference Poecilia_formosa-5.1.2

    Range
    898767..969514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007548306.2 → XP_007548368.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A087XI78
    Related
    ENSPFOP00000005481.2, ENSPFOT00000005490.2
    Conserved Domains (2) summary
    pfam00685
    Location:612 → 862
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:26 → 522
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
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