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eral1 Era-like 12S mitochondrial rRNA chaperone 1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103133854, updated on 11-Mar-2024

Summary

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Gene symbol
eral1
Gene description
Era-like 12S mitochondrial rRNA chaperone 1
See related
Ensembl:ENSPFOG00000018592
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See eral1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799953.1 (447911..457278, complement)

NW_006799953.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107835575 Neighboring gene uncharacterized LOC103133855 Neighboring gene family with sequence similarity 222 member Ba Neighboring gene transient receptor potential cation channel, subfamily V, member 1 Neighboring gene sedoheptulokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799953.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosomal small subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTPase Era, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799953.1 Reference Poecilia_formosa-5.1.2

    Range
    447911..457278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007545798.2 → XP_007545860.1  GTPase Era, mitochondrial

    UniProtKB/TrEMBL
    A0A087YL05
    Related
    ENSPFOP00000018708.2, ENSPFOT00000018730.2
    Conserved Domains (3) summary
    cd04163
    Location:107 → 250
    Era; E. coli Ras-like protein (Era) is a multifunctional GTPase
    COG1159
    Location:103 → 451
    Era; GTPase Era, involved in 16S rRNA processing [Translation, ribosomal structure and biogenesis]
    pfam07650
    Location:377 → 445
    KH_2; KH domain
Nucleotide Protein
Heading Accession and Version

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