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LOC103131055 beta-1,4-galactosyltransferase 1-like [ Poecilia formosa (Amazon molly) ]

Gene ID: 103131055, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103131055
Gene description
beta-1,4-galactosyltransferase 1-like
See related
Ensembl:ENSPFOG00000004585
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC103131055 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800652.1 (115898..119241, complement)

NW_006800652.1Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 1b allele 3-like Neighboring gene NACHT, LRR and PYD domains-containing protein 1b allele 3-like Neighboring gene beta-1,4-galactosyltransferase 2-like Neighboring gene NACHT, LRR and PYD domains-containing protein 1b allele 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800652.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800652.1 Reference Poecilia_formosa-5.1.2

    Range
    115898..119241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007542613.2 → XP_007542675.1  beta-1,4-galactosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A087XFC0
    Related
    ENSPFOP00000004473.2, ENSPFOT00000004481.1
    Conserved Domains (1) summary
    cd00899
    Location:124 → 342
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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