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DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103080238, updated on 25-Jan-2024

Summary

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Gene symbol
DNAJB6
Gene description
DnaJ (Hsp40) homolog, subfamily B, member 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
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Genomic context

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See DNAJB6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006790887.1 (434535..488771)

NW_006790887.1Genomic Context describing neighboring genes Neighboring gene ubiquitin protein ligase E3C Neighboring gene uncharacterized LOC103082523 Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene proline-rich protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006790887 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006790887.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    434535..488771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007463983.1 → XP_007464045.1  dnaJ homolog subfamily B member 6-like

    See identical proteins and their annotated locations for XP_007464045.1

    UniProtKB/TrEMBL
    A0A340XXV0
    Conserved Domains (2) summary
    COG0484
    Location:2 → 137
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  2. XM_007463982.1 → XP_007464044.1  dnaJ homolog subfamily B member 6-like

    UniProtKB/TrEMBL
    A0A340XXL3
    Conserved Domains (2) summary
    COG0484
    Location:2 → 137
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  3. XM_007463984.1 → XP_007464046.1  dnaJ homolog subfamily B member 6-like

    See identical proteins and their annotated locations for XP_007464046.1

    UniProtKB/TrEMBL
    A0A340XXV0
    Conserved Domains (2) summary
    COG0484
    Location:2 → 137
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain
Nucleotide Protein
Heading Accession and Version

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