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SGCA sarcoglycan alpha [ Python bivittatus (Burmese python) ]

Gene ID: 103054718, updated on 11-Mar-2024

Summary

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Gene symbol
SGCA
Gene description
sarcoglycan alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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See SGCA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006532477.1 (91347..121461)

NW_006532477.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene spermatid-specific linker histone H1-like protein Neighboring gene collagen type I alpha 1 chain Neighboring gene transmembrane protein 92

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006532477 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan
Names
sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006532477.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    91347..121461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007424843.2 → XP_007424905.1  alpha-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A9F2NVR6
    Conserved Domains (1) summary
    pfam05510
    Location:29 → 361
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_025164537.1 → XP_025020305.1  alpha-sarcoglycan isoform X4

    UniProtKB/TrEMBL
    A0A9F5IBG1
    Conserved Domains (1) summary
    pfam05510
    Location:29 → 266
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  3. XM_007424845.2 → XP_007424907.1  alpha-sarcoglycan isoform X3

    UniProtKB/TrEMBL
    A0A9F2KW99
    Conserved Domains (1) summary
    pfam05510
    Location:29 → 291
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  4. XM_025164536.1 → XP_025020304.1  alpha-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A9F5IBU6
    Conserved Domains (1) summary
    pfam05510
    Location:12 → 307
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

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