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kiaa0319l KIAA0319-like ortholog [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103041131, updated on 11-Mar-2024

Summary

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Gene symbol
kiaa0319l
Gene description
KIAA0319-like ortholog
See related
EnsemblRapid:ENSAMXG00025000822
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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See kiaa0319l in Genome Data Viewer
Location:
chromosome: 3
Exon count:
23
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 3 NC_064410.1 (50711640..50735234)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 23 NC_035919.1 (29423417..29447209)

Chromosome 3 - NC_064410.1Genomic Context describing neighboring genes Neighboring gene RAD21 cohesin complex component b Neighboring gene uncharacterized si:ch211-199g17.2 Neighboring gene SYCE1 domain-containing protein Neighboring gene family with sequence similarity 83 member Hb Neighboring gene CAP, adenylate cyclase-associated protein 1 (yeast) Neighboring gene palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dyslexia-associated protein KIAA0319-like protein
Names
KIAA0319 like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064410.1 Reference AstMex3_surface

    Range
    50711640..50735234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007245699.4 → XP_007245761.3  dyslexia-associated protein KIAA0319-like protein

    Related
    ENSAMXP00025002139.1, ENSAMXT00025002516.1

  2. XM_049475934.1 → XP_049331891.1  dyslexia-associated protein KIAA0319-like protein

    Related
    ENSAMXP00025002137.1, ENSAMXT00025002511.1
Nucleotide Protein
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