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chst14 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103039455, updated on 11-Mar-2024

Summary

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Gene symbol
chst14
Gene description
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
See related
EnsemblRapid:ENSAMXG00025010954
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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See chst14 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 1 NC_064408.1 (63923958..63934545, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 3 NC_035899.1 (64591657..64602638)

Chromosome 1 - NC_064408.1Genomic Context describing neighboring genes Neighboring gene aminoadipate-semialdehyde dehydrogenase Neighboring gene capping protein inhibiting regulator of actin dynamics Neighboring gene centrosomal protein 135 Neighboring gene exocyst complex component 1 Neighboring gene uncharacterized LOC111191943

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate proteoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064408.1 Reference AstMex3_surface

    Range
    63923958..63934545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007259517.4 → XP_007259579.2  carbohydrate sulfotransferase 14

    Related
    ENSAMXP00025013701.1, ENSAMXT00025019937.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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