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mgat1a alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103038529, updated on 10-Oct-2024

Summary

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Gene symbol
mgat1a
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a
See related
EnsemblRapid:ENSAMXG00025025179
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
zebrafish all
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Genomic context

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See mgat1a in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 18 NC_064425.1 (26887072..26892492, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 1 NC_035897.1 (7123071..7133611, complement)

Chromosome 18 - NC_064425.1Genomic Context describing neighboring genes Neighboring gene SH3-binding domain protein 5-like, a Neighboring gene gastrula zinc finger protein XlCGF7.1-like Neighboring gene uncharacterized LOC125782625 Neighboring gene uncharacterized LOC125782626 Neighboring gene uncharacterized LOC125782627

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064425.1 Reference AstMex3_surface

    Range
    26887072..26892492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007238805.4 → XP_007238867.3  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a

    UniProtKB/TrEMBL
    A0A8B9HDA4
    Related
    ENSAMXP00025040533.1, ENSAMXT00025052032.1
Nucleotide Protein
Heading Accession and Version

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