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hs3st1l2 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103036825, updated on 11-Mar-2024

Summary

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Gene symbol
hs3st1l2
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2
See related
EnsemblRapid:ENSAMXG00025032045
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
zebrafish all
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Genomic context

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See hs3st1l2 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 22 NC_064429.1 (30573323..30613500)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172906.1 (40799..78352, complement)

Chromosome 22 - NC_064429.1Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 Neighboring gene protein transport protein Sec24C Neighboring gene histone H2A.V Neighboring gene purine-rich element binding protein Ba

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064429.1 Reference AstMex3_surface

    Range
    30573323..30613500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007238143.4 → XP_007238205.2  heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2

    Related
    ENSAMXP00025052260.1, ENSAMXT00025067359.1

  2. XM_007238144.4 → XP_007238206.2  heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2

    Related
    ENSAMXP00025052269.1, ENSAMXT00025067368.1
Nucleotide Protein
Heading Accession and Version

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