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stt3b STT3 oligosaccharyltransferase complex catalytic subunit B [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103035958, updated on 11-Mar-2024

Summary

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Gene symbol
stt3b
Gene description
STT3 oligosaccharyltransferase complex catalytic subunit B
See related
EnsemblRapid:ENSAMXG00025042051
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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See stt3b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 6 NC_064413.1 (30586422..30640447, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 10 NC_035906.1 (19254201..19320340)

Chromosome 6 - NC_064413.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein-like 10b Neighboring gene glycerol-3-phosphate dehydrogenase 1 like Neighboring gene uncharacterized LOC125802414 Neighboring gene transforming growth factor beta receptor 2b Neighboring gene RNA binding motif, single stranded interacting protein Neighboring gene uncharacterized LOC125802511

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Names
STT3B, catalytic subunit of the oligosaccharyltransferase complex

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064413.1 Reference AstMex3_surface

    Range
    30586422..30640447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022673723.2 → XP_022529444.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    UniProtKB/TrEMBL
    A0A3B1JBB7, A0A8T2M043
    Related
    ENSAMXP00025071667.1, ENSAMXT00025092791.1
    Conserved Domains (1) summary
    pfam02516
    Location:54 → 546
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

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