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b3gnt2b UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103035833, updated on 11-Mar-2024

Summary

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Gene symbol
b3gnt2b
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b
See related
EnsemblRapid:ENSAMXG00025038698
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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See b3gnt2b in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 14 NC_064421.1 (30263022..30294343)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 9 NC_035905.1 (15451123..15483016, complement)

Chromosome 14 - NC_064421.1Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 12, lysophospholipase Neighboring gene protein FAM161A Neighboring gene EH domain binding protein 1 Neighboring gene uncharacterized LOC125781132 Neighboring gene uncharacterized LOC111193203

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064421.1 Reference AstMex3_surface

    Range
    30263022..30294343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022672781.2 → XP_022528502.2  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 isoform X1

    Related
    ENSAMXP00025066837.1, ENSAMXT00025085057.1

  2. XM_007244637.4 → XP_007244699.3  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 isoform X2

    Related
    ENSAMXP00025066842.1, ENSAMXT00025085062.1

RNA

  1. XR_002650336.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases