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gcnt4a glucosaminyl (N-acetyl) transferase 4a [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103033386, updated on 10-Oct-2024

Summary

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Gene symbol
gcnt4a
Gene description
glucosaminyl (N-acetyl) transferase 4a
See related
EnsemblRapid:ENSAMXG00025030139
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
gcnt4
Orthologs
human zebrafish all
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Genomic context

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See gcnt4a in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 22 NC_064429.1 (25362297..25368243, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172906.1 (5412042..5416620)

Chromosome 22 - NC_064429.1Genomic Context describing neighboring genes Neighboring gene protein-O-mannosyltransferase 1 Neighboring gene family with sequence similarity 169 member Aa Neighboring gene ankyrin repeat domain 31 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
Names
glucosaminyl (N-acetyl) transferase 4, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064429.1 Reference AstMex3_surface

    Range
    25362297..25368243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007243918.3 → XP_007243980.3  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4

    UniProtKB/TrEMBL
    A0A8B9J557
    Related
    ENSAMXP00025049112.1, ENSAMXT00025063122.1
Nucleotide Protein
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Gene LinkOut

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