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ogt.1 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103028765, updated on 6-Jun-2024

Summary

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Gene symbol
ogt.1
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1
See related
EnsemblRapid:ENSAMXG00025034427
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
ogt
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
24
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 10 NC_064417.1 (388172..408142)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 24 NC_035920.1 (18249391..18269233)

Chromosome 10 - NC_064417.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103029928 Neighboring gene small nucleolar RNA SNORA74 Neighboring gene FH2 domain containing 2 Neighboring gene germ cell nuclear acidic peptidase Neighboring gene centrin, EF-hand protein, 2 Neighboring gene NAD(P) dependent steroid dehydrogenase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064417.1 Reference AstMex3_surface

    Range
    388172..408142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007228440.4 → XP_007228502.2  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    UniProtKB/TrEMBL
    W5L513

  2. XM_007228442.4 → XP_007228504.2  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X3

    UniProtKB/TrEMBL
    A0A8B9H8W4

  3. XM_007228441.4 → XP_007228503.2  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    UniProtKB/TrEMBL
    W5L513

  4. XM_007228443.4 → XP_007228505.2  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4

    UniProtKB/TrEMBL
    A0A8T2LLV4, W5L515

  5. XM_007228444.4 → XP_007228506.2  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X5

    Related
    ENSAMXP00025059245.1, ENSAMXT00025075356.1
Nucleotide Protein
Heading Accession and Version

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