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b3gat3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103028547, updated on 11-Mar-2024

Summary

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Gene symbol
b3gat3
Gene description
beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
See related
EnsemblRapid:ENSAMXG00025006028
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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See b3gat3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 8 NC_064415.1 (24412260..24419420)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 16 NC_035912.1 (30679934..30687107, complement)

Chromosome 8 - NC_064415.1Genomic Context describing neighboring genes Neighboring gene REST corepressor 2 Neighboring gene N-alpha-acetyltransferase 40, NatD catalytic subunit Neighboring gene uncharacterized LOC103029165 Neighboring gene uncharacterized LOC103028861 Neighboring gene small nucleolar RNA SNORD31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064415.1 Reference AstMex3_surface

    Range
    24412260..24419420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007248083.4 → XP_007248145.3  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

    Related
    ENSAMXP00025008245.1, ENSAMXT00025011296.1
Nucleotide Protein
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Gene LinkOut

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