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ABALON apoptotic BCL2L1-antisense long non-coding RNA [ Homo sapiens (human) ]

Gene ID: 103021294, updated on 20-Oct-2024

Summary

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Official Symbol
ABALONprovided by HGNC
Official Full Name
apoptotic BCL2L1-antisense long non-coding RNAprovided by HGNC
Primary source
HGNC:HGNC:49667
See related
Ensembl:ENSG00000281376 MIM:616018; AllianceGenome:HGNC:49667
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
INXS
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Genomic context

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See ABALON in Genome Data Viewer
Location:
20q11.21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (31721507..31723409)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (33446119..33448021)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (30309310..30311212)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904883 Neighboring gene VISTA enhancer hs2050 Neighboring gene BCL2 like 1 Neighboring gene BCL2L1 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30285857-30286804 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17690 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17691 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17692 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17693 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30300575-30301102 Neighboring gene Sharpr-MPRA regulatory region 251 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17694 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12761 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17695 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30310290-30311045 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30311046-30311800 Neighboring gene ReSE screen-validated silencer GRCh37_chr20:30316344-30316520 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17698 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17699 Neighboring gene TPX2 microtubule nucleation factor Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:30373423-30373922 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:30376059-30376558 Neighboring gene ATP synthase membrane subunit f pseudogene 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

General gene information

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Other Names

  • apoptotic BCL-X-associated long ncRNA
  • intronic BCL-XS-inducing lncRNA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    31721507..31723409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_131907.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    33446119..33448021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_131907.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_131907.1: Suppressed sequence

    Description
    NR_131907.1: This RefSeq was removed because currently there is insufficient support for the transcript.
Nucleotide Protein
Heading Accession and Version

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