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PKDCC protein kinase domain containing, cytoplasmic [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103010710, updated on 11-Mar-2024

Summary

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Gene symbol
PKDCC
Gene description
protein kinase domain containing, cytoplasmic
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See PKDCC in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 12 NC_080075.1 (59486283..59496331, complement)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006725432.1 (1363369..1372977, complement)

Chromosome 12 - NC_080075.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130709406 Neighboring gene EMAP like 4 Neighboring gene solute carrier family 8 member A1 Neighboring gene receptor-binding cancer antigen expressed on SiSo cells-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular tyrosine-protein kinase PKDCC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080075.1 Reference mBalAcu1.1

    Range
    59486283..59496331 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057558659.1 → XP_057414642.1  extracellular tyrosine-protein kinase PKDCC isoform X5

  2. XM_057558658.1 → XP_057414641.1  extracellular tyrosine-protein kinase PKDCC isoform X4

  3. XM_007167165.3 → XP_007167227.2  extracellular tyrosine-protein kinase PKDCC isoform X2

  4. XM_057558657.1 → XP_057414640.1  extracellular tyrosine-protein kinase PKDCC isoform X3

  5. XM_057558656.1 → XP_057414639.1  extracellular tyrosine-protein kinase PKDCC isoform X1

Nucleotide Protein
Heading Accession and Version

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