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ASGR2 asialoglycoprotein receptor 2 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103003142, updated on 11-Mar-2024

Summary

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Gene symbol
ASGR2
Gene description
asialoglycoprotein receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See ASGR2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 20 NC_080083.1 (9842835..9857710)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006725366.1 (2675576..2691128)

Chromosome 20 - NC_080083.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 8 Neighboring gene asialoglycoprotein receptor 1 Neighboring gene C-type lectin domain containing 10A Neighboring gene solute carrier family 16 member 11 Neighboring gene solute carrier family 16 member 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asialoglycoprotein receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080083.1 Reference mBalAcu1.1

    Range
    9842835..9857710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007166477.2 → XP_007166539.1  asialoglycoprotein receptor 2 isoform X1

    See identical proteins and their annotated locations for XP_007166539.1

    UniProtKB/TrEMBL
    A0A383YUJ1
    Conserved Domains (2) summary
    cd03590
    Location:171 → 295
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:29 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  2. XM_007166476.3 → XP_007166538.1  asialoglycoprotein receptor 2 isoform X1

    See identical proteins and their annotated locations for XP_007166538.1

    UniProtKB/TrEMBL
    A0A383YUJ1
    Conserved Domains (2) summary
    cd03590
    Location:171 → 295
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:29 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  3. XM_007166479.2 → XP_007166541.1  asialoglycoprotein receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A383YUS2
    Conserved Domains (2) summary
    cd03590
    Location:152 → 276
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:23 → 144
    Lectin_N; Hepatic lectin, N-terminal domain
Nucleotide Protein
Heading Accession and Version

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