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ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103002546, updated on 11-Mar-2024

Summary

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Gene symbol
ST3GAL5
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See ST3GAL5 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 12 NC_080075.1 (15143893..15197000)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006726165.1 (1677476..1707941)

Chromosome 12 - NC_080075.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene BTB/POZ domain-containing protein 9-like Neighboring gene atonal bHLH transcription factor 8 Neighboring gene surfactant protein B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080075.1 Reference mBalAcu1.1

    Range
    15143893..15197000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057558395.1 → XP_057414378.1  lactosylceramide alpha-2,3-sialyltransferase isoform X1

  2. XM_057558396.1 → XP_057414379.1  lactosylceramide alpha-2,3-sialyltransferase isoform X3

  3. XM_028164785.2 → XP_028020586.2  lactosylceramide alpha-2,3-sialyltransferase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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