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HS6ST1 heparan sulfate 6-O-sulfotransferase 1 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 102999462, updated on 10-Mar-2024

Summary

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Gene symbol
HS6ST1
Gene description
heparan sulfate 6-O-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See HS6ST1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 8 NC_080071.1 (101993355..102036430)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006727353.1 (7087144..7090551, complement)

Chromosome 8 - NC_080071.1Genomic Context describing neighboring genes Neighboring gene 60 kDa heat shock protein, mitochondrial-like Neighboring gene U2 spliceosomal RNA Neighboring gene UDP-glucose glycoprotein glucosyltransferase 1 Neighboring gene Sin3A associated protein 130

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: heparan-sulfate 6-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080071.1 Reference mBalAcu1.1

    Range
    101993355..102036430
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057551696.1 → XP_057407679.1  LOW QUALITY PROTEIN: heparan-sulfate 6-O-sulfotransferase 1

Nucleotide Protein
Heading Accession and Version

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