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LOC102998895 carbohydrate sulfotransferase 6 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 102998895, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102998895
Gene description
carbohydrate sulfotransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Also known as
CHST6
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Genomic context

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See LOC102998895 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 19 NC_080082.1 (12503693..12515033)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006727242.1 (18396199..18398682)

Chromosome 19 - NC_080082.1Genomic Context describing neighboring genes Neighboring gene GABA type A receptor associated protein like 2 Neighboring gene transmembrane protein 231 Neighboring gene transmembrane protein 170A Neighboring gene tigger transposable element-derived protein 1 Neighboring gene craniofacial development protein 1 Neighboring gene acyl carrier protein, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080082.1 Reference mBalAcu1.1

    Range
    12503693..12515033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007182609.2 → XP_007182671.1  carbohydrate sulfotransferase 6

    See identical proteins and their annotated locations for XP_007182671.1

    UniProtKB/TrEMBL
    A0A384A5N0
    Conserved Domains (1) summary
    cl21551
    Location:43 → 297
    Sulfotransfer_3; Sulfotransferase family

  2. XM_057534933.1 → XP_057390916.1  carbohydrate sulfotransferase 6

    UniProtKB/TrEMBL
    A0A384A5N0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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